Team, Visitors, External Collaborators
Overall Objectives
Research Program
Application Domains
Highlights of the Year
New Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
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Section: Research Program

Axis 2: Algorithms

The main goal of the GenScale team is to develop optimized tools dedicated to genomic data processing. Optimization can be seen both in terms of space (low memory footprint) and in terms of time (fast execution time). The first point is mainly related to advanced data structures as presented in the previous section (axis 1). The second point relies on new algorithms and, when possible implementation on parallel structures (axis 3).

We do not have the ambition to cover the vast panel of software related to genomic data processing needs. We particularly focused on the following areas: