Team, Visitors, External Collaborators
Overall Objectives
Research Program
Application Domains
Highlights of the Year
New Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
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Section: New Software and Platforms


Keywords: Fluorescence microscopy - Photonic imaging - Image analysis - Detection - 3D - Health - Biology - Segmentation

Functional Description: The C-CRAFT software enables to jointly segment small particles and estimate background in 2D or 3D fluorescence microscopy image sequences. The vesicle segmentation and background estimation problem is formulated as a global energy minimization problem in the Conditional Random Field framework. A patch-based image representation is used to detect spatial irregularity in the image. An iterative scheme based on graph-cut algorithm is proposed for energy minimization.