Inria
/
Raweb 2010
Presentation of the Team sequoia2
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sequoia2
Algorithms for large scale sequence analysis
2010 Research Team Activity Report
Lille - Nord Europe
Field :
Computational Sciences for Biology, Medicine and the Environment
Theme : Computational Biology and Bioinformatics
Presentation of the Team
- Activity Report in
PDF
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ePub
(
test
) format
Members
Overall Objectives
Presentation
Highlights
Scientific Foundations
Combinatorial models and algorithms
High-performance computing
Discrete statistics and probability
Application Domains
Software
YASS – local homology search
Carnac – RNA structure prediction
TFM-Explorer – Identification and analysis of transcription factor binding sites
Regliss – RNA locally optimal structures
RNAspace – a platform for noncoding RNA annotation
CGseq – a toolbox for comparative analysis
Biomanycores.org – a community for bioinformatics on manycore processors
Norine – a resource for nonribsomal peptides
New Results
High-throughtput sequence processing
Cis-regulatory elements
Noncoding RNAs
Genome rearrangements
Non-ribosomal peptides
Other Grants and Activities
Regional Initiatives
National Initiatives
European Initiatives
Dissemination
Animation of the scientific community
Teaching
Popular science
Administrative activities
PhD theses committess
Editorial and reviewing activities
Bibliography
Publications of the year
References in notes
