Inria
/
Raweb 2009
Presentation of the Project sequoia
Logo Inria
sequoia
Algorithms for large-scale sequence analysis for molecular biology
2009 Research Team Activity Report
Lille - Nord Europe
Area :
Computational Sciences for Biology, Medicine and the Environment
Theme : Computational Biology and Bioinformatics
Presentation of the Project-Team
- Activity Report in
PDF
or
XML
format
Members
Overall Objectives
Highlights of the year
Objectives
Scientific Foundations
Introduction
Sequence processing and Next Generation Sequencing
Comparative analysis and Noncoding RNAs
Non ribosomal peptides synthesis
High-performance bioinformatics
Software
Introduction
YASS – local homology search
Carnac – RNA structure prediction
Gardenia – RNA structure alignment
Regliss – RNA locally optimal structures
Protea – coding sequence identification
Magnolia – multiple alignment via comparative analysis
CG-seq – comparative genomics
RNAspace – a platform for noncoding RNA annotation
Norine – a resource for nonribosomal peptides
New Results
Sequence processing and Next-Generation Sequencing
Protein coding sequences
Comparative analysis and Noncoding RNAs
Non ribosomal peptides synthesis
High-performance bioinformatics
Genome rearrangements
Contracts and Grants with Industry
NVIDIA
Other Grants and Activities
Regional initiatives and cooperations
National initiatives and cooperations
International initiatives and cooperations
Dissemination
Organization of workshops and seminars
Editorial and reviewing activities
Miscellaneous activities
Meetings attended and talks
Teaching activities
Administrative activities
Bibliography
Major publications
Publications of the year
References in notes
