Team Digiplante

Members
Overall Objectives
Scientific Foundations
Application Domains
Software
New Results
Contracts and Grants with Industry
Other Grants and Activities
Dissemination
Bibliography

Bibliography

Major publications by the team in recent years

[1]
P.-H. Cournède, P. de Reffye.
From the dynamical system of the isolated plant to that of tree stand, in: GreenLab Workshop 2004, BeiJing (China), October 2004.
[2]
P. de Reffye, M. Goursat, J. Quadrat, B.-G. Hu.
The Dynamic equations of the tree morphogenesis GreenLab model, in: PMA'03, Beijing, China, Tsinghua University Press and Springer, 2003.
[3]
B.-G. Hu, P. de Reffye, X. Zhao, H. Yan, M. Kang.
GreenLab: A New Methodology towards Plant Functional-Structural Model. Structural Aspect, in: PMA'03, Beijing, China, Tsinghua University Press and Springer, 2003.
[4]
M. Kang, P.-H. Cournède, J. Le Roux, P. de Reffye, B.-G. Hu.
Theoretical Study and Numerical Simulation of a Stochastic Model for Plant Growth, in: CARI'04, Hammamet, Tunisia, 2004.
[5]
M. Kang, P.-H. Cournède, J. Le Roux, P. de Reffye, B.-G. Hu.
Theoretical Study and Numerical Simulation of a Stochastic Model for Plant Growth, in: Proc. of CARI, Tunis, November 2004.
[6]
M. Kang, P. de Reffye, H. B.-G. Barczi.
Fast Algorithm for Stochastic 3D Tree Computation and Forest Simulation, in: WSCG'2003 - the 11-th International Conference in Central Europe on Computer Graphics, Visualization and Computer Vision'2003 in co-operation with EUROGRAPHICS, 2003.
[7]
M. Kang, H. Yan, P. de Reffye, M. Jaeger, B.-G. Hu, F. Houllier.
A fast algorithm for calculating stem and branch radial growth in a tree, in: IUFRO colloque, Vancouver, September 2002.
[8]
A. Mathieu, P.-H. Cournède, P. de Reffye.
A Dynamical Model of Plant Growth with Full Retroaction between Organogenesis and Photosynthesis, in: Proc. of CARI, Tunis, November 2004.
[9]
A. Mathieu, P.-H. Cournède, P. de Reffye.
The Influence of Photosynthesis on the Number of Metamers per Growth Unit in GreenLab Model, in: Proc. 4th Int. Wor. On FSPM, Montpellier, June 2004.
[10]
C. Soler, F. Sillion, F. Blaise, P. de Reffye.
An Efficient Instantiation Algorithm for Simulating Radiant Energy Transfer in Plant Models, in: ACM Transactions On Graphics, April 2003, vol. 22, no 2.
[11]
L. Wu, F.-X. Le Dimet, B.-G. Hu, P.-H. Cournède, P. de Reffye.
A Water Supply Optimization Problem for Plant Growth Based on GreenLab Model, in: Proc. of CARI, Tunis, November 2004.
[12]
H. Yan, P. de Reffye, J. Le Roux, B.-G. Hu.
Study on Plant Growth Behaviors Simulated by the Functional-structural Plant Model GreenLab, in: PMA'03, Beijing, China, Tsinghua University Press and Springer, 2003.
[13]
H. Yan, M. Kang, P. de Reffye, M. Dingkuhn.
A dynamic, architectural plant model simulating resource-dependent growth, in: Annals of Botany, 2004, vol. 93, p. 591-602.

Publications of the year

Articles in refereed journals and book chapters

[14]
P. H. Cournède, M. Z. Kang, A. Mathieu, J.-F. Barczi, H. P. Yan, P. de Reffye.
Structural factorization of plants to compute their functional and architectural growth, in: Simulation - Transaction of the Society for modeling and simulation international, 2006, vol. 82(7), p. 427-438.
[15]
Y. Guo, Y. Ma, Z. Zhan, B. Li, M. Dingkuhn, T. D. Luque, P. de Reffye.
Parameter optimization and field validation of the functional-structural model GREENLAB for maize, in: Annals of Botany, 2006, vol. 97(2), p. 217-230.

Publications in Conferences and Workshops

[16]
J. F. Barczi, H. Rey, Y. Caraglio, P. de Reffye, D. Barthélémy, Q. X. Dong, T. Fourcaud.
An integrative whole-plant architecture simulator based on botanical and environmental plasticity knowledge, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[17]
Z. Cheng, X. Zhang, T. Fourcaud.
Tree skeleton extraction from a single range image, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[18]
A. Christophe, V. Letort, P. de Reffye, P.-H. Cournède.
Analyse of Arabidopsis growth and development based on the dynamic model Greenlab, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[19]
P.-H. Cournède, P. de Reffye.
A functional and architectural model of competition for plant growth, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[20]
Q. Deng, X. Zhang, M. Jaeger.
Fast and progressive simplification of computer foliage, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[21]
Q. X. Dong, G. Louarn, Y. M. Wang, J.-F. Barczi, P. de Reffye.
Modelling the phenotypic plasticity of the tomato crop (Lycopersicon esculentum Mill.) in response to light and planting density using the structural-functional model GreenLab, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[22]
H. Guo, V. Letort, M. Z. Kang, L. X. Hong, T. Fourcaud, Y. C. Lu.
Analysis of assimilate source and sink forces in Pinus tabulaeformis Carr. using the functional-structural model Greenlab, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[23]
M. Z. Kang, P. de Reffye.
A mathematical approach estimating source and sink functioning of competing organs, in: Proceeding of the Frontis workshop on Functional-structural plant modeling in crop production, Wageningen, J. V. Crop, Weed Ecology Group (editors), Wageningen UR Frontis Series, Springer, 5-8 march 2006, p. 1-11.
[24]
M. Kang, J. B. Evers, J. Vos, P. de Reffye.
Fitting weight of individual organs in spring wheat using the GreenLab model, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[25]
M. Z. Kang, E. Heuvelink, P. de Reffye.
Building virtual chrysanthemum based on sink source relationships: preliminary results, in: International Symposium on the Labiatae: Advances in Production, Biotechnology and Utilisation, San Remo, Italy, C. Cervelli, B. Ruffoni, C. D. Guda (editors), ISHS. Acta Horticulturae, Vol. 723, 11-15 september 2006.
[26]
M. Kang, J. P. Quadrat, P. de Reffye.
Plant distribution from the GreenLab stochastic organogenesis model, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[27]
V. Le Chevalier, A. Lesluye, M. Jaeger, X. Mei, P.-H. Cournède.
Simulation and Visualization of Functional Landscapes : Effects of the Competition between Plants, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[28]
V. Letort, P. Mahe, P.-H. Cournède, B. Courtois, P. de Reffye.
Quantitative genetics and plant growth simulation: a theoretical study of linking quantitative trait Loci (QTL) to model parameters, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[29]
Y. Ma, M. Wen, Y. Guo, B. Li, P.-H. Cournède, P. de Reffye.
Evaluation of functional-structural model GreenLab-Maize with sparse experimental data, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[30]
A. Mathieu, P.-H. Cournède, D. Barthélémy, P. de Reffye.
Generation of rhythms in plant development controlled by their functioning: theoretical and numerical study, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[31]
X. Mei, M. Jaeger, B. Hu.
A effective stratified sampling scheme for environment maps with median cut method, in: 3rd International Conference on Computer Graphics, Imaging and visualisation CIV06, University of Technology of Sydney, 2006.
[32]
X. Ning, J.-F. Barczi, B. Hu.
A study on branching structures o f ones year old branch of apple tree by pruning using hidden semi-markov chain, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[33]
H. Rey, P.-H. Cournède, P. de Reffye, J. Lecoeur.
Sunflower (Helanthus annuus sp.) growth analysis by source - sink relationships study with GreenLab model, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[34]
Y. H. Song, D. Luquet, A. Mathieu, P. de Reffye, M. Dingkuhn.
Characterizing and modelling rice vegetative morphogenesis, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[35]
Z. Zhan, H. Rey, D. Li, Y. Guo, P. de Reffye.
On functional leaes behaviour in Gossypium growth with respect to defoliation experimentations, in: PMA06 The Second International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Beijing, China, November 13-17 2006.
[36]
X. Zhang, F. Blaise, M. Jaeger.
Multiresolution plant models with complex organs, in: ACM International conference on virtual Reality continuum and its Applications, VRCIA 2006, Hong Kong, ACM Press, 14-17 june 2006, p. 331-334.

References in notes

[37]
Z. Zhan, P. de Reffye, F. Houllier, B.-G. Hu.
Fitting a Structural-Functional Model with Plant Architectural Data, in: PMA'03, Beijing, China, Tsinghua University Press and Springer, 2003.

previous
next